Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEO18362.1 | SEO30536.1 | SAMN04490248_102153 | SAMN04490248_103253 | Uncharacterized conserved protein, DUF952 family. | Hypothetical protein. | 0.473 |
SEO30476.1 | SEO30497.1 | SAMN04490248_103250 | SAMN04490248_103251 | Sarcosine oxidase subunit beta. | Cytochrome c-type biogenesis protein CcmH. | 0.508 |
SEO30476.1 | SEO30517.1 | SAMN04490248_103250 | SAMN04490248_103252 | Sarcosine oxidase subunit beta. | Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.511 |
SEO30476.1 | SEO30536.1 | SAMN04490248_103250 | SAMN04490248_103253 | Sarcosine oxidase subunit beta. | Hypothetical protein. | 0.509 |
SEO30497.1 | SEO30476.1 | SAMN04490248_103251 | SAMN04490248_103250 | Cytochrome c-type biogenesis protein CcmH. | Sarcosine oxidase subunit beta. | 0.508 |
SEO30497.1 | SEO30517.1 | SAMN04490248_103251 | SAMN04490248_103252 | Cytochrome c-type biogenesis protein CcmH. | Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.856 |
SEO30497.1 | SEO30536.1 | SAMN04490248_103251 | SAMN04490248_103253 | Cytochrome c-type biogenesis protein CcmH. | Hypothetical protein. | 0.887 |
SEO30517.1 | SEO30476.1 | SAMN04490248_103252 | SAMN04490248_103250 | Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | Sarcosine oxidase subunit beta. | 0.511 |
SEO30517.1 | SEO30497.1 | SAMN04490248_103252 | SAMN04490248_103251 | Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | Cytochrome c-type biogenesis protein CcmH. | 0.856 |
SEO30517.1 | SEO30536.1 | SAMN04490248_103252 | SAMN04490248_103253 | Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | Hypothetical protein. | 0.856 |
SEO30536.1 | SEO18362.1 | SAMN04490248_103253 | SAMN04490248_102153 | Hypothetical protein. | Uncharacterized conserved protein, DUF952 family. | 0.473 |
SEO30536.1 | SEO30476.1 | SAMN04490248_103253 | SAMN04490248_103250 | Hypothetical protein. | Sarcosine oxidase subunit beta. | 0.509 |
SEO30536.1 | SEO30497.1 | SAMN04490248_103253 | SAMN04490248_103251 | Hypothetical protein. | Cytochrome c-type biogenesis protein CcmH. | 0.887 |
SEO30536.1 | SEO30517.1 | SAMN04490248_103253 | SAMN04490248_103252 | Hypothetical protein. | Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.856 |
SEO30536.1 | SEO52948.1 | SAMN04490248_103253 | SAMN04490248_106144 | Hypothetical protein. | Hypothetical protein. | 0.699 |
SEO30536.1 | SEO56652.1 | SAMN04490248_103253 | SAMN04490248_10710 | Hypothetical protein. | Predicted secreted protein. | 0.610 |
SEO30536.1 | SEO63621.1 | SAMN04490248_103253 | SAMN04490248_10874 | Hypothetical protein. | Protein of unknown function. | 0.441 |
SEO30536.1 | SEO93123.1 | SAMN04490248_103253 | SAMN04490248_11675 | Hypothetical protein. | Hypothetical protein. | 0.490 |
SEO52948.1 | SEO30536.1 | SAMN04490248_106144 | SAMN04490248_103253 | Hypothetical protein. | Hypothetical protein. | 0.699 |
SEO52948.1 | SEO56652.1 | SAMN04490248_106144 | SAMN04490248_10710 | Hypothetical protein. | Predicted secreted protein. | 0.439 |
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