STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO35814.1Sarcosine oxidase subunit gamma. (183 aa)    
Predicted Functional Partners:
SEO35852.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
 0.999
SEO35883.1
Sarcosine oxidase subunit delta.
 
 0.999
SEO30414.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
 0.996
SEO27328.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
 
 0.994
SEO27278.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
 
 0.991
SEO30431.1
Sarcosine oxidase subunit delta.
 
 0.986
SEO06052.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
  
 0.983
SEO35912.1
Sarcosine oxidase subunit beta.
 
  0.956
SEO59726.1
Glutamate synthase (NADPH) large subunit.
    
  0.882
SEO30393.1
Sarcosine oxidase subunit gamma.
  
  
  0.859
Your Current Organism:
Salinihabitans flavidus
NCBI taxonomy Id: 569882
Other names: CCUG 56758, DSM 27842, KCTC 22485, Rhodobacteraceae bacterium ISL-46, S. flavidus, Salinihabitans flavidus Yoon et al. 2009, strain ISL-46
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.