Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEO35939.1 | SEO37107.1 | SAMN04490248_104108 | SAMN04490248_104146 | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Agmatinase; Belongs to the arginase family. | 0.710 |
SEO35939.1 | SEO37277.1 | SAMN04490248_104108 | SAMN04490248_104152 | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Predicted amidohydrolase. | 0.876 |
SEO35939.1 | SEO59726.1 | SAMN04490248_104108 | SAMN04490248_107120 | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate synthase (NADPH) large subunit. | 0.999 |
SEO35939.1 | SEO86462.1 | SAMN04490248_104108 | SAMN04490248_11466 | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | NAD-dependent formate dehydrogenase catalytic subunit /NAD-dependent formate dehydrogenase iron-sulfur protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.430 |
SEO35939.1 | SEP08308.1 | SAMN04490248_104108 | SAMN04490248_12350 | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Aldehyde dehydrogenase (NAD+). | 0.859 |
SEO35939.1 | SEP15320.1 | SAMN04490248_104108 | SAMN04490248_1302 | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.863 |
SEO37107.1 | SEO35939.1 | SAMN04490248_104146 | SAMN04490248_104108 | Agmatinase; Belongs to the arginase family. | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.710 |
SEO37107.1 | SEO37159.1 | SAMN04490248_104146 | SAMN04490248_104148 | Agmatinase; Belongs to the arginase family. | Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.550 |
SEO37107.1 | SEO37225.1 | SAMN04490248_104146 | SAMN04490248_104150 | Agmatinase; Belongs to the arginase family. | Putative spermidine/putrescine transport system permease protein. | 0.553 |
SEO37107.1 | SEO37277.1 | SAMN04490248_104146 | SAMN04490248_104152 | Agmatinase; Belongs to the arginase family. | Predicted amidohydrolase. | 0.830 |
SEO37107.1 | SEO59726.1 | SAMN04490248_104146 | SAMN04490248_107120 | Agmatinase; Belongs to the arginase family. | Glutamate synthase (NADPH) large subunit. | 0.821 |
SEO37107.1 | SEP08308.1 | SAMN04490248_104146 | SAMN04490248_12350 | Agmatinase; Belongs to the arginase family. | Aldehyde dehydrogenase (NAD+). | 0.685 |
SEO37159.1 | SEO37107.1 | SAMN04490248_104148 | SAMN04490248_104146 | Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | Agmatinase; Belongs to the arginase family. | 0.550 |
SEO37159.1 | SEO37225.1 | SAMN04490248_104148 | SAMN04490248_104150 | Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | Putative spermidine/putrescine transport system permease protein. | 0.969 |
SEO37159.1 | SEO37277.1 | SAMN04490248_104148 | SAMN04490248_104152 | Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | Predicted amidohydrolase. | 0.806 |
SEO37225.1 | SEO37107.1 | SAMN04490248_104150 | SAMN04490248_104146 | Putative spermidine/putrescine transport system permease protein. | Agmatinase; Belongs to the arginase family. | 0.553 |
SEO37225.1 | SEO37159.1 | SAMN04490248_104150 | SAMN04490248_104148 | Putative spermidine/putrescine transport system permease protein. | Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.969 |
SEO37225.1 | SEO37277.1 | SAMN04490248_104150 | SAMN04490248_104152 | Putative spermidine/putrescine transport system permease protein. | Predicted amidohydrolase. | 0.811 |
SEO37277.1 | SEO35939.1 | SAMN04490248_104152 | SAMN04490248_104108 | Predicted amidohydrolase. | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.876 |
SEO37277.1 | SEO37107.1 | SAMN04490248_104152 | SAMN04490248_104146 | Predicted amidohydrolase. | Agmatinase; Belongs to the arginase family. | 0.830 |
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