Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEO03083.1 | SEO15639.1 | SAMN04490248_10193 | SAMN04490248_10245 | Membrane associated serine protease, rhomboid family. | Hypothetical protein. | 0.409 |
SEO03083.1 | SEO38246.1 | SAMN04490248_10193 | SAMN04490248_104184 | Membrane associated serine protease, rhomboid family. | SlyX protein. | 0.603 |
SEO03083.1 | SEO50191.1 | SAMN04490248_10193 | SAMN04490248_10644 | Membrane associated serine protease, rhomboid family. | Hypothetical protein. | 0.717 |
SEO03083.1 | SEO69361.1 | SAMN04490248_10193 | SAMN04490248_109113 | Membrane associated serine protease, rhomboid family. | Protein RodZ, contains Xre-like HTH and DUF4115 domains. | 0.640 |
SEO03083.1 | SEO75141.1 | SAMN04490248_10193 | SAMN04490248_11153 | Membrane associated serine protease, rhomboid family. | Hypothetical protein. | 0.749 |
SEO03083.1 | SEO83076.1 | SAMN04490248_10193 | SAMN04490248_11381 | Membrane associated serine protease, rhomboid family. | Hypothetical protein. | 0.554 |
SEO15639.1 | SEO03083.1 | SAMN04490248_10245 | SAMN04490248_10193 | Hypothetical protein. | Membrane associated serine protease, rhomboid family. | 0.409 |
SEO15639.1 | SEO38246.1 | SAMN04490248_10245 | SAMN04490248_104184 | Hypothetical protein. | SlyX protein. | 0.673 |
SEO15639.1 | SEO50191.1 | SAMN04490248_10245 | SAMN04490248_10644 | Hypothetical protein. | Hypothetical protein. | 0.697 |
SEO15639.1 | SEO69361.1 | SAMN04490248_10245 | SAMN04490248_109113 | Hypothetical protein. | Protein RodZ, contains Xre-like HTH and DUF4115 domains. | 0.695 |
SEO15639.1 | SEO75141.1 | SAMN04490248_10245 | SAMN04490248_11153 | Hypothetical protein. | Hypothetical protein. | 0.688 |
SEO15639.1 | SEO83076.1 | SAMN04490248_10245 | SAMN04490248_11381 | Hypothetical protein. | Hypothetical protein. | 0.755 |
SEO38146.1 | SEO38158.1 | SAMN04490248_104180 | SAMN04490248_104181 | ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. | ATP phosphoribosyltransferase regulatory subunit. | 0.999 |
SEO38146.1 | SEO38246.1 | SAMN04490248_104180 | SAMN04490248_104184 | ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. | SlyX protein. | 0.609 |
SEO38146.1 | hisS | SAMN04490248_104180 | SAMN04490248_104182 | ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. | histidyl-tRNA synthetase. | 0.998 |
SEO38158.1 | SEO38146.1 | SAMN04490248_104181 | SAMN04490248_104180 | ATP phosphoribosyltransferase regulatory subunit. | ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. | 0.999 |
SEO38158.1 | SEO38246.1 | SAMN04490248_104181 | SAMN04490248_104184 | ATP phosphoribosyltransferase regulatory subunit. | SlyX protein. | 0.686 |
SEO38158.1 | SEO50191.1 | SAMN04490248_104181 | SAMN04490248_10644 | ATP phosphoribosyltransferase regulatory subunit. | Hypothetical protein. | 0.442 |
SEO38158.1 | SEO75141.1 | SAMN04490248_104181 | SAMN04490248_11153 | ATP phosphoribosyltransferase regulatory subunit. | Hypothetical protein. | 0.557 |
SEO38158.1 | hisS | SAMN04490248_104181 | SAMN04490248_104182 | ATP phosphoribosyltransferase regulatory subunit. | histidyl-tRNA synthetase. | 0.994 |
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