Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEO18657.1 | SEO21341.1 | SAMN04490248_102165 | SAMN04490248_102279 | Urea carboxylase. | aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A; Belongs to the amidase family. | 0.924 |
SEO18657.1 | SEO38683.1 | SAMN04490248_102165 | SAMN04490248_104201 | Urea carboxylase. | Amidase. | 0.825 |
SEO18657.1 | gatA | SAMN04490248_102165 | SAMN04490248_106175 | Urea carboxylase. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | 0.827 |
SEO21341.1 | SEO18657.1 | SAMN04490248_102279 | SAMN04490248_102165 | aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A; Belongs to the amidase family. | Urea carboxylase. | 0.924 |
SEO21341.1 | SEO38683.1 | SAMN04490248_102279 | SAMN04490248_104201 | aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A; Belongs to the amidase family. | Amidase. | 0.762 |
SEO21341.1 | SEO63478.1 | SAMN04490248_102279 | SAMN04490248_10868 | aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A; Belongs to the amidase family. | Nitrile hydratase. | 0.911 |
SEO21341.1 | SEO86817.1 | SAMN04490248_102279 | SAMN04490248_11481 | aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A; Belongs to the amidase family. | 4-hydroxyphenylpyruvate dioxygenase. | 0.724 |
SEO21341.1 | SEO98285.1 | SAMN04490248_102279 | SAMN04490248_11838 | aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A; Belongs to the amidase family. | 2-aminobenzoate-CoA ligase. | 0.755 |
SEO21341.1 | SEP14720.1 | SAMN04490248_102279 | SAMN04490248_12924 | aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A; Belongs to the amidase family. | Acylphosphatase. | 0.798 |
SEO21341.1 | SEP22300.1 | SAMN04490248_102279 | SAMN04490248_14210 | aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A; Belongs to the amidase family. | 4-hydroxyphenylpyruvate dioxygenase. | 0.793 |
SEO21341.1 | gatA | SAMN04490248_102279 | SAMN04490248_106175 | aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A; Belongs to the amidase family. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | 0.804 |
SEO21341.1 | gatB | SAMN04490248_102279 | SAMN04490248_10437 | aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A; Belongs to the amidase family. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.998 |
SEO21341.1 | gatC | SAMN04490248_102279 | SAMN04490248_106174 | aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A; Belongs to the amidase family. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.996 |
SEO38683.1 | SEO18657.1 | SAMN04490248_104201 | SAMN04490248_102165 | Amidase. | Urea carboxylase. | 0.825 |
SEO38683.1 | SEO21341.1 | SAMN04490248_104201 | SAMN04490248_102279 | Amidase. | aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A; Belongs to the amidase family. | 0.762 |
SEO38683.1 | SEO63478.1 | SAMN04490248_104201 | SAMN04490248_10868 | Amidase. | Nitrile hydratase. | 0.705 |
SEO38683.1 | SEO86817.1 | SAMN04490248_104201 | SAMN04490248_11481 | Amidase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.669 |
SEO38683.1 | SEO98285.1 | SAMN04490248_104201 | SAMN04490248_11838 | Amidase. | 2-aminobenzoate-CoA ligase. | 0.668 |
SEO38683.1 | SEP14720.1 | SAMN04490248_104201 | SAMN04490248_12924 | Amidase. | Acylphosphatase. | 0.668 |
SEO38683.1 | SEP22300.1 | SAMN04490248_104201 | SAMN04490248_14210 | Amidase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.687 |
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