STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO38792.1Gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03. (530 aa)    
Predicted Functional Partners:
SEO59726.1
Glutamate synthase (NADPH) large subunit.
     
 0.856
SEO38760.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
       0.775
SEO38730.1
TRAP transporter, DctM subunit.
       0.774
SEO38823.1
DNA-binding transcriptional regulator, GntR family.
       0.773
pepA
Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
  
  
 0.755
SEO04591.1
Leucyl aminopeptidase; Belongs to the peptidase M17 family.
  
  
 0.749
gshB
Glutathione synthase; Belongs to the prokaryotic GSH synthase family.
    
 0.724
SEO79556.1
NADPH-glutathione reductase; Maintains high levels of reduced glutathione.
     
 0.723
SEP05886.1
Gamma-glutamyltranspeptidase / glutathione hydrolase.
  
  
 
0.723
SEO35939.1
Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.713
Your Current Organism:
Salinihabitans flavidus
NCBI taxonomy Id: 569882
Other names: CCUG 56758, DSM 27842, KCTC 22485, Rhodobacteraceae bacterium ISL-46, S. flavidus, Salinihabitans flavidus Yoon et al. 2009, strain ISL-46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.