STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO35181.1Hypothetical protein. (511 aa)    
Predicted Functional Partners:
SEO35161.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
 0.958
SEO57340.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
  
 0.924
SEO57318.1
Acyl transferase domain-containing protein.
 
    0.873
SEO57220.1
Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
  
 0.869
SEO57274.1
Natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
 
     0.851
SEO57295.1
Hypothetical protein.
 
  
 0.849
SEO35099.1
Polymer biosynthesis protein, WecB/TagA/CpsF family; Belongs to the glycosyltransferase 26 family.
 
   
 0.836
SEO34992.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
 0.835
SEO57386.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
 0.830
SEO34968.1
Glycosyltransferase, GT2 family.
 
  
 0.827
Your Current Organism:
Salinihabitans flavidus
NCBI taxonomy Id: 569882
Other names: CCUG 56758, DSM 27842, KCTC 22485, Rhodobacteraceae bacterium ISL-46, S. flavidus, Salinihabitans flavidus Yoon et al. 2009, strain ISL-46
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.