Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEO44671.1 | SEO44699.1 | SAMN04490248_105116 | SAMN04490248_105117 | Hypothetical protein. | Biotin-(acetyl-CoA carboxylase) ligase. | 0.969 |
SEO44671.1 | SEO44721.1 | SAMN04490248_105116 | SAMN04490248_105118 | Hypothetical protein. | ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.844 |
SEO44671.1 | SEO44749.1 | SAMN04490248_105116 | SAMN04490248_105119 | Hypothetical protein. | Hypothetical protein. | 0.965 |
SEO44671.1 | SEO44780.1 | SAMN04490248_105116 | SAMN04490248_105120 | Hypothetical protein. | Cytochrome c. | 0.917 |
SEO44671.1 | SEO44809.1 | SAMN04490248_105116 | SAMN04490248_105121 | Hypothetical protein. | 4Fe-4S dicluster domain-containing protein. | 0.866 |
SEO44671.1 | SEO44832.1 | SAMN04490248_105116 | SAMN04490248_105122 | Hypothetical protein. | Protein of unknown function. | 0.828 |
SEO44671.1 | SEO44858.1 | SAMN04490248_105116 | SAMN04490248_105123 | Hypothetical protein. | Protein of unknown function. | 0.801 |
SEO44671.1 | SEO44950.1 | SAMN04490248_105116 | SAMN04490248_105126 | Hypothetical protein. | Formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.774 |
SEO44671.1 | SEO45016.1 | SAMN04490248_105116 | SAMN04490248_105128 | Hypothetical protein. | Formate dehydrogenase gamma subunit. | 0.793 |
SEO44699.1 | SEO44671.1 | SAMN04490248_105117 | SAMN04490248_105116 | Biotin-(acetyl-CoA carboxylase) ligase. | Hypothetical protein. | 0.969 |
SEO44699.1 | SEO44721.1 | SAMN04490248_105117 | SAMN04490248_105118 | Biotin-(acetyl-CoA carboxylase) ligase. | ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.847 |
SEO44699.1 | SEO44749.1 | SAMN04490248_105117 | SAMN04490248_105119 | Biotin-(acetyl-CoA carboxylase) ligase. | Hypothetical protein. | 0.965 |
SEO44699.1 | SEO44780.1 | SAMN04490248_105117 | SAMN04490248_105120 | Biotin-(acetyl-CoA carboxylase) ligase. | Cytochrome c. | 0.921 |
SEO44699.1 | SEO44809.1 | SAMN04490248_105117 | SAMN04490248_105121 | Biotin-(acetyl-CoA carboxylase) ligase. | 4Fe-4S dicluster domain-containing protein. | 0.875 |
SEO44699.1 | SEO44832.1 | SAMN04490248_105117 | SAMN04490248_105122 | Biotin-(acetyl-CoA carboxylase) ligase. | Protein of unknown function. | 0.832 |
SEO44699.1 | SEO44858.1 | SAMN04490248_105117 | SAMN04490248_105123 | Biotin-(acetyl-CoA carboxylase) ligase. | Protein of unknown function. | 0.801 |
SEO44699.1 | SEO44950.1 | SAMN04490248_105117 | SAMN04490248_105126 | Biotin-(acetyl-CoA carboxylase) ligase. | Formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.811 |
SEO44699.1 | SEO45016.1 | SAMN04490248_105117 | SAMN04490248_105128 | Biotin-(acetyl-CoA carboxylase) ligase. | Formate dehydrogenase gamma subunit. | 0.810 |
SEO44699.1 | SEP15320.1 | SAMN04490248_105117 | SAMN04490248_1302 | Biotin-(acetyl-CoA carboxylase) ligase. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.842 |
SEO44721.1 | SEO44671.1 | SAMN04490248_105118 | SAMN04490248_105116 | ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | Hypothetical protein. | 0.844 |
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