STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO46090.1Acetyltransferase (GNAT) family protein. (149 aa)    
Predicted Functional Partners:
selO
Uncharacterized conserved protein YdiU, UPF0061 family; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.
       0.830
SEO79483.1
Hypothetical protein.
  
     0.672
SEO34546.1
Protein of unknown function.
  
     0.634
SEO33953.1
Hypothetical protein.
  
     0.629
SEO24957.1
Cro/C1-type HTH DNA-binding domain-containing protein.
  
  
  0.591
SEP01235.1
Hypothetical protein.
  
     0.588
SEO79167.1
Hypothetical protein.
  
     0.573
SEO86017.1
Hypothetical protein.
  
     0.570
SEO26060.1
Glycosyl transferase family 2.
  
     0.556
SEO46114.1
Uncharacterised 5xTM membrane BCR, YitT family COG1284.
       0.554
Your Current Organism:
Salinihabitans flavidus
NCBI taxonomy Id: 569882
Other names: CCUG 56758, DSM 27842, KCTC 22485, Rhodobacteraceae bacterium ISL-46, S. flavidus, Salinihabitans flavidus Yoon et al. 2009, strain ISL-46
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