STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO52778.1PTSINtr with GAF domain, PtsP; Belongs to the PEP-utilizing enzyme family. (746 aa)    
Predicted Functional Partners:
SEO86986.1
Phosphocarrier protein.
  
 
 0.988
SEO36825.1
PAS domain S-box-containing protein.
   
  0.825
SEO08493.1
PTS IIA-like nitrogen-regulatory protein PtsN.
  
   
 0.807
SEO52752.1
PAS domain-containing protein.
  
 0.803
SEP00190.1
Adenylate cyclase.
    
  0.795
SEO52809.1
Aspartate kinase; Belongs to the aspartokinase family.
     
 0.749
SEP24973.1
Methionine synthase I (cobalamin-dependent), methyltransferase domain.
    
  0.746
SEO86961.1
PTS system, mannose-specific IIA component.
  
   
 0.726
SEO03455.1
Adenylate cyclase.
    
  0.701
SEO52838.1
Hypothetical protein.
 
     0.661
Your Current Organism:
Salinihabitans flavidus
NCBI taxonomy Id: 569882
Other names: CCUG 56758, DSM 27842, KCTC 22485, Rhodobacteraceae bacterium ISL-46, S. flavidus, Salinihabitans flavidus Yoon et al. 2009, strain ISL-46
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.