Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEO19106.1 | SEO33531.1 | SAMN04490248_102185 | SAMN04490248_10420 | PAS domain S-box-containing protein. | Methyl-accepting chemotaxis protein. | 0.956 |
SEO19106.1 | SEO36825.1 | SAMN04490248_102185 | SAMN04490248_104137 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SEO19106.1 | SEO54245.1 | SAMN04490248_102185 | SAMN04490248_106187 | PAS domain S-box-containing protein. | Response regulator receiver protein. | 0.998 |
SEO19106.1 | SEO54275.1 | SAMN04490248_102185 | SAMN04490248_106188 | PAS domain S-box-containing protein. | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.992 |
SEO19106.1 | SEO54302.1 | SAMN04490248_102185 | SAMN04490248_106189 | PAS domain S-box-containing protein. | Purine-binding chemotaxis protein CheW. | 0.985 |
SEO19106.1 | SEO54335.1 | SAMN04490248_102185 | SAMN04490248_106190 | PAS domain S-box-containing protein. | Two-component system, chemotaxis family, sensor kinase CheA. | 0.989 |
SEO19106.1 | SEO57605.1 | SAMN04490248_102185 | SAMN04490248_10744 | PAS domain S-box-containing protein. | Hypothetical protein. | 0.999 |
SEO19106.1 | SEO71582.1 | SAMN04490248_102185 | SAMN04490248_11046 | PAS domain S-box-containing protein. | Response regulator receiver domain-containing protein. | 0.999 |
SEO19106.1 | SEO97606.1 | SAMN04490248_102185 | SAMN04490248_11810 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SEO19106.1 | SEP21728.1 | SAMN04490248_102185 | SAMN04490248_14016 | PAS domain S-box-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.999 |
SEO33531.1 | SEO19106.1 | SAMN04490248_10420 | SAMN04490248_102185 | Methyl-accepting chemotaxis protein. | PAS domain S-box-containing protein. | 0.956 |
SEO33531.1 | SEO36825.1 | SAMN04490248_10420 | SAMN04490248_104137 | Methyl-accepting chemotaxis protein. | PAS domain S-box-containing protein. | 0.996 |
SEO33531.1 | SEO54245.1 | SAMN04490248_10420 | SAMN04490248_106187 | Methyl-accepting chemotaxis protein. | Response regulator receiver protein. | 0.963 |
SEO33531.1 | SEO54275.1 | SAMN04490248_10420 | SAMN04490248_106188 | Methyl-accepting chemotaxis protein. | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.989 |
SEO33531.1 | SEO54302.1 | SAMN04490248_10420 | SAMN04490248_106189 | Methyl-accepting chemotaxis protein. | Purine-binding chemotaxis protein CheW. | 0.999 |
SEO33531.1 | SEO54335.1 | SAMN04490248_10420 | SAMN04490248_106190 | Methyl-accepting chemotaxis protein. | Two-component system, chemotaxis family, sensor kinase CheA. | 0.999 |
SEO33531.1 | SEO57605.1 | SAMN04490248_10420 | SAMN04490248_10744 | Methyl-accepting chemotaxis protein. | Hypothetical protein. | 0.947 |
SEO33531.1 | SEO71582.1 | SAMN04490248_10420 | SAMN04490248_11046 | Methyl-accepting chemotaxis protein. | Response regulator receiver domain-containing protein. | 0.808 |
SEO33531.1 | SEO97606.1 | SAMN04490248_10420 | SAMN04490248_11810 | Methyl-accepting chemotaxis protein. | PAS domain S-box-containing protein. | 0.955 |
SEO33531.1 | SEP21728.1 | SAMN04490248_10420 | SAMN04490248_14016 | Methyl-accepting chemotaxis protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.946 |
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