STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO54245.1Response regulator receiver protein. (128 aa)    
Predicted Functional Partners:
SEO36825.1
PAS domain S-box-containing protein.
 
 0.999
SEO19106.1
PAS domain S-box-containing protein.
 
 0.998
SEO97606.1
PAS domain S-box-containing protein.
 
 0.998
SEO54335.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.993
SEO57605.1
Hypothetical protein.
 
 0.993
SEO54302.1
Purine-binding chemotaxis protein CheW.
 
  
 0.991
SEO71582.1
Response regulator receiver domain-containing protein.
 
 0.977
SEO33531.1
Methyl-accepting chemotaxis protein.
 
  
 0.963
SEO54275.1
MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
 
 
 0.962
SEP21728.1
Diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.911
Your Current Organism:
Salinihabitans flavidus
NCBI taxonomy Id: 569882
Other names: CCUG 56758, DSM 27842, KCTC 22485, Rhodobacteraceae bacterium ISL-46, S. flavidus, Salinihabitans flavidus Yoon et al. 2009, strain ISL-46
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