STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO49080.1Nitroreductase. (192 aa)    
Predicted Functional Partners:
SEO49045.1
Uncharacterized protein involved in cysteine biosynthesis.
  
    0.878
SEP00649.1
uroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
    
 0.853
SEO49098.1
Hypothetical protein; Belongs to the UPF0235 family.
       0.662
SEP24222.1
Reductive dehalogenase.
  
  
 0.550
ribB
GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
   
 
 0.549
SEP19626.1
ABC transporter.
  
  
 0.537
SEO59726.1
Glutamate synthase (NADPH) large subunit.
     
 0.526
SEO27145.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
  
 
 0.487
SEO71011.1
Chromosome partitioning protein.
      
 0.463
SEP09157.1
Chromosome partitioning protein.
      
 0.463
Your Current Organism:
Salinihabitans flavidus
NCBI taxonomy Id: 569882
Other names: CCUG 56758, DSM 27842, KCTC 22485, Rhodobacteraceae bacterium ISL-46, S. flavidus, Salinihabitans flavidus Yoon et al. 2009, strain ISL-46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.