STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO59230.1Glycosyl transferase family 2. (356 aa)    
Predicted Functional Partners:
SEO49590.1
precorrin-8X methylmutase.
  
 
 0.859
SEP00926.1
Hypothetical protein.
     0.825
SEO49424.1
Precorrin-4 C11-methyltransferase; Belongs to the precorrin methyltransferase family.
  
  
 0.782
SEP10203.1
Hypothetical protein.
  
     0.760
SEO86340.1
Sulfotransferase family protein.
  
     0.752
SEP00649.1
uroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
  
 
 0.752
SEO79093.1
Hypothetical protein.
  
     0.751
SEO49505.1
precorrin-6A reductase.
 
 
 0.737
SEO08344.1
Hypothetical protein.
     0.716
SEP06406.1
Hypothetical protein.
  
     0.715
Your Current Organism:
Salinihabitans flavidus
NCBI taxonomy Id: 569882
Other names: CCUG 56758, DSM 27842, KCTC 22485, Rhodobacteraceae bacterium ISL-46, S. flavidus, Salinihabitans flavidus Yoon et al. 2009, strain ISL-46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.