STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO59696.1Hint domain-containing protein. (301 aa)    
Predicted Functional Partners:
SEP08117.1
Hemolysin-type calcium-binding repeat-containing protein.
 
  0.841
SEP09472.1
Regulatory P domain of the subtilisin-like proprotein convertase.
 
 
 0.796
SEO08549.1
Core-2/I-Branching enzyme.
  
     0.767
SEO08569.1
Glycosyl transferase family 2.
  
     0.748
SEO20550.1
Capsular polysaccharide export protein.
  
     0.725
SEO64707.1
Intein N-terminal splicing region.
  
  
 
0.715
SEP10203.1
Hypothetical protein.
  
     0.695
SEO28839.1
Hypothetical protein.
  
     0.693
SEO79093.1
Hypothetical protein.
  
     0.691
SEO86340.1
Sulfotransferase family protein.
  
     0.691
Your Current Organism:
Salinihabitans flavidus
NCBI taxonomy Id: 569882
Other names: CCUG 56758, DSM 27842, KCTC 22485, Rhodobacteraceae bacterium ISL-46, S. flavidus, Salinihabitans flavidus Yoon et al. 2009, strain ISL-46
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