STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO71503.1Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family. (328 aa)    
Predicted Functional Partners:
SEO71429.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
SEO71403.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
 
  0.971
SEO42178.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.959
SEO71533.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
  0.949
SEO38043.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.931
SEO71378.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
 
 
  0.912
SEP04213.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.898
SEO38122.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
  0.886
SEO42285.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
  0.878
SEO71556.1
Long-chain acyl-CoA synthetase.
 
    0.851
Your Current Organism:
Salinihabitans flavidus
NCBI taxonomy Id: 569882
Other names: CCUG 56758, DSM 27842, KCTC 22485, Rhodobacteraceae bacterium ISL-46, S. flavidus, Salinihabitans flavidus Yoon et al. 2009, strain ISL-46
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