Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEO71893.1 | SEO71923.1 | SAMN04490248_11058 | SAMN04490248_11059 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Copper chaperone NosL. | 0.962 |
SEO71893.1 | SEO71943.1 | SAMN04490248_11058 | SAMN04490248_11060 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Cu-processing system permease protein. | 0.959 |
SEO71893.1 | SEO71968.1 | SAMN04490248_11058 | SAMN04490248_11061 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Cu-processing system ATP-binding protein. | 0.941 |
SEO71893.1 | SEO71993.1 | SAMN04490248_11058 | SAMN04490248_11062 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Nitrous oxidase accessory protein. | 0.960 |
SEO71893.1 | SEO72036.1 | SAMN04490248_11058 | SAMN04490248_11064 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator. | 0.982 |
SEO71893.1 | SEO72063.1 | SAMN04490248_11058 | SAMN04490248_11065 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Transcriptional regulator, BadM/Rrf2 family. | 0.505 |
SEO71893.1 | nosZ | SAMN04490248_11058 | SAMN04490248_11063 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Nitrous oxide reductase apoprotein; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family. | 0.966 |
SEO71923.1 | SEO71893.1 | SAMN04490248_11059 | SAMN04490248_11058 | Copper chaperone NosL. | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | 0.962 |
SEO71923.1 | SEO71943.1 | SAMN04490248_11059 | SAMN04490248_11060 | Copper chaperone NosL. | Cu-processing system permease protein. | 0.999 |
SEO71923.1 | SEO71968.1 | SAMN04490248_11059 | SAMN04490248_11061 | Copper chaperone NosL. | Cu-processing system ATP-binding protein. | 0.972 |
SEO71923.1 | SEO71993.1 | SAMN04490248_11059 | SAMN04490248_11062 | Copper chaperone NosL. | Nitrous oxidase accessory protein. | 0.999 |
SEO71923.1 | SEO72036.1 | SAMN04490248_11059 | SAMN04490248_11064 | Copper chaperone NosL. | NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator. | 0.986 |
SEO71923.1 | SEO72063.1 | SAMN04490248_11059 | SAMN04490248_11065 | Copper chaperone NosL. | Transcriptional regulator, BadM/Rrf2 family. | 0.511 |
SEO71923.1 | SEO77828.1 | SAMN04490248_11059 | SAMN04490248_11220 | Copper chaperone NosL. | ABC-2 type transport system ATP-binding protein. | 0.507 |
SEO71923.1 | SEO86388.1 | SAMN04490248_11059 | SAMN04490248_11463 | Copper chaperone NosL. | ABC-2 type transport system ATP-binding protein. | 0.507 |
SEO71923.1 | SEP19626.1 | SAMN04490248_11059 | SAMN04490248_1361 | Copper chaperone NosL. | ABC transporter. | 0.514 |
SEO71923.1 | nosZ | SAMN04490248_11059 | SAMN04490248_11063 | Copper chaperone NosL. | Nitrous oxide reductase apoprotein; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family. | 0.981 |
SEO71943.1 | SEO71893.1 | SAMN04490248_11060 | SAMN04490248_11058 | Cu-processing system permease protein. | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | 0.959 |
SEO71943.1 | SEO71923.1 | SAMN04490248_11060 | SAMN04490248_11059 | Cu-processing system permease protein. | Copper chaperone NosL. | 0.999 |
SEO71943.1 | SEO71968.1 | SAMN04490248_11060 | SAMN04490248_11061 | Cu-processing system permease protein. | Cu-processing system ATP-binding protein. | 0.995 |
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