Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEO57318.1 | SEO59726.1 | SAMN04490248_10733 | SAMN04490248_107120 | Acyl transferase domain-containing protein. | Glutamate synthase (NADPH) large subunit. | 0.911 |
SEO57318.1 | SEO74496.1 | SAMN04490248_10733 | SAMN04490248_11123 | Acyl transferase domain-containing protein. | Succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.819 |
SEO57318.1 | SEO74672.1 | SAMN04490248_10733 | SAMN04490248_11132 | Acyl transferase domain-containing protein. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.678 |
SEO57318.1 | SEO81218.1 | SAMN04490248_10733 | SAMN04490248_1139 | Acyl transferase domain-containing protein. | Cytochrome P450. | 0.999 |
SEO57318.1 | SEO95325.1 | SAMN04490248_10733 | SAMN04490248_11731 | Acyl transferase domain-containing protein. | Citrate synthase; Belongs to the citrate synthase family. | 0.820 |
SEO57318.1 | SEP22300.1 | SAMN04490248_10733 | SAMN04490248_14210 | Acyl transferase domain-containing protein. | 4-hydroxyphenylpyruvate dioxygenase. | 0.814 |
SEO57318.1 | SEP24222.1 | SAMN04490248_10733 | SAMN04490248_1502 | Acyl transferase domain-containing protein. | Reductive dehalogenase. | 0.727 |
SEO57318.1 | fmt | SAMN04490248_10733 | SAMN04490248_10726 | Acyl transferase domain-containing protein. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.675 |
SEO57318.1 | gcvP | SAMN04490248_10733 | SAMN04490248_11354 | Acyl transferase domain-containing protein. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.562 |
SEO57971.1 | SEO59726.1 | SAMN04490248_10756 | SAMN04490248_107120 | Phosphonopyruvate decarboxylase. | Glutamate synthase (NADPH) large subunit. | 0.852 |
SEO57971.1 | SEO74496.1 | SAMN04490248_10756 | SAMN04490248_11123 | Phosphonopyruvate decarboxylase. | Succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.701 |
SEO57971.1 | SEO74672.1 | SAMN04490248_10756 | SAMN04490248_11132 | Phosphonopyruvate decarboxylase. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.438 |
SEO57971.1 | SEO95325.1 | SAMN04490248_10756 | SAMN04490248_11731 | Phosphonopyruvate decarboxylase. | Citrate synthase; Belongs to the citrate synthase family. | 0.652 |
SEO57971.1 | SEP24222.1 | SAMN04490248_10756 | SAMN04490248_1502 | Phosphonopyruvate decarboxylase. | Reductive dehalogenase. | 0.689 |
SEO59726.1 | SEO57318.1 | SAMN04490248_107120 | SAMN04490248_10733 | Glutamate synthase (NADPH) large subunit. | Acyl transferase domain-containing protein. | 0.911 |
SEO59726.1 | SEO57971.1 | SAMN04490248_107120 | SAMN04490248_10756 | Glutamate synthase (NADPH) large subunit. | Phosphonopyruvate decarboxylase. | 0.852 |
SEO59726.1 | SEO74496.1 | SAMN04490248_107120 | SAMN04490248_11123 | Glutamate synthase (NADPH) large subunit. | Succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.876 |
SEO59726.1 | SEO74672.1 | SAMN04490248_107120 | SAMN04490248_11132 | Glutamate synthase (NADPH) large subunit. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.908 |
SEO59726.1 | SEO81218.1 | SAMN04490248_107120 | SAMN04490248_1139 | Glutamate synthase (NADPH) large subunit. | Cytochrome P450. | 0.582 |
SEO59726.1 | SEO95325.1 | SAMN04490248_107120 | SAMN04490248_11731 | Glutamate synthase (NADPH) large subunit. | Citrate synthase; Belongs to the citrate synthase family. | 0.936 |
page 1 of 4