Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEO75801.1 | SEO75820.1 | SAMN04490248_11183 | SAMN04490248_11184 | D-alanine transaminase. | L-alanine-DL-glutamate epimerase. | 0.770 |
SEO75801.1 | SEO75844.1 | SAMN04490248_11183 | SAMN04490248_11185 | D-alanine transaminase. | Uncharacterized conserved protein, NAD-dependent epimerase/dehydratase family. | 0.673 |
SEO75820.1 | SEO75801.1 | SAMN04490248_11184 | SAMN04490248_11183 | L-alanine-DL-glutamate epimerase. | D-alanine transaminase. | 0.770 |
SEO75820.1 | SEO75844.1 | SAMN04490248_11184 | SAMN04490248_11185 | L-alanine-DL-glutamate epimerase. | Uncharacterized conserved protein, NAD-dependent epimerase/dehydratase family. | 0.953 |
SEO75844.1 | SEO75801.1 | SAMN04490248_11185 | SAMN04490248_11183 | Uncharacterized conserved protein, NAD-dependent epimerase/dehydratase family. | D-alanine transaminase. | 0.673 |
SEO75844.1 | SEO75820.1 | SAMN04490248_11185 | SAMN04490248_11184 | Uncharacterized conserved protein, NAD-dependent epimerase/dehydratase family. | L-alanine-DL-glutamate epimerase. | 0.953 |