Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEO02595.1 | SEO10900.1 | SAMN04490248_10176 | SAMN04490248_101379 | Formate dehydrogenase. | Protein SCO1/2. | 0.404 |
SEO02595.1 | SEO78849.1 | SAMN04490248_10176 | SAMN04490248_11272 | Formate dehydrogenase. | Small redox-active disulfide protein 2. | 0.910 |
SEO05736.1 | SEO78849.1 | SAMN04490248_101187 | SAMN04490248_11272 | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | Small redox-active disulfide protein 2. | 0.876 |
SEO05736.1 | SEO91982.1 | SAMN04490248_101187 | SAMN04490248_11624 | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin). | 0.908 |
SEO05736.1 | SEP08289.1 | SAMN04490248_101187 | SAMN04490248_12349 | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin). | 0.908 |
SEO10900.1 | SEO02595.1 | SAMN04490248_101379 | SAMN04490248_10176 | Protein SCO1/2. | Formate dehydrogenase. | 0.404 |
SEO10900.1 | SEO78849.1 | SAMN04490248_101379 | SAMN04490248_11272 | Protein SCO1/2. | Small redox-active disulfide protein 2. | 0.892 |
SEO78849.1 | SEO02595.1 | SAMN04490248_11272 | SAMN04490248_10176 | Small redox-active disulfide protein 2. | Formate dehydrogenase. | 0.910 |
SEO78849.1 | SEO05736.1 | SAMN04490248_11272 | SAMN04490248_101187 | Small redox-active disulfide protein 2. | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | 0.876 |
SEO78849.1 | SEO10900.1 | SAMN04490248_11272 | SAMN04490248_101379 | Small redox-active disulfide protein 2. | Protein SCO1/2. | 0.892 |
SEO78849.1 | SEO78875.1 | SAMN04490248_11272 | SAMN04490248_11273 | Small redox-active disulfide protein 2. | Hypothetical protein. | 0.935 |
SEO78849.1 | SEO78931.1 | SAMN04490248_11272 | SAMN04490248_11274 | Small redox-active disulfide protein 2. | Transcriptional regulator, ArsR family. | 0.892 |
SEO78849.1 | SEO91982.1 | SAMN04490248_11272 | SAMN04490248_11624 | Small redox-active disulfide protein 2. | Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin). | 0.924 |
SEO78849.1 | SEP08289.1 | SAMN04490248_11272 | SAMN04490248_12349 | Small redox-active disulfide protein 2. | Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin). | 0.924 |
SEO78849.1 | msrA | SAMN04490248_11272 | SAMN04490248_101342 | Small redox-active disulfide protein 2. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.941 |
SEO78849.1 | msrA-2 | SAMN04490248_11272 | SAMN04490248_11086 | Small redox-active disulfide protein 2. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.941 |
SEO78849.1 | rpoB | SAMN04490248_11272 | SAMN04490248_1118 | Small redox-active disulfide protein 2. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.869 |
SEO78875.1 | SEO78849.1 | SAMN04490248_11273 | SAMN04490248_11272 | Hypothetical protein. | Small redox-active disulfide protein 2. | 0.935 |
SEO78875.1 | SEO78931.1 | SAMN04490248_11273 | SAMN04490248_11274 | Hypothetical protein. | Transcriptional regulator, ArsR family. | 0.925 |
SEO78931.1 | SEO78849.1 | SAMN04490248_11274 | SAMN04490248_11272 | Transcriptional regulator, ArsR family. | Small redox-active disulfide protein 2. | 0.892 |
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