STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO86489.1N-carbamoyl-L-amino-acid hydrolase. (400 aa)    
Predicted Functional Partners:
SEO75295.1
OHCU decarboxylase.
   
 0.948
SEO82104.1
Dihydropyrimidinase.
 
 
 0.921
SEO82229.1
Dihydroorotate oxidase B, catalytic subunit.
 
 0.860
SEO18032.1
(S)-ureidoglycine aminohydrolase.
  
 
 0.772
SEP08308.1
Aldehyde dehydrogenase (NAD+).
 
   
  0.731
SEO82258.1
Glutamate synthase (NADPH/NADH) small chain.
 
 
  0.685
SEO59791.1
Glutamate synthase (NADPH) small subunit.
  
 
  0.639
SEO98789.1
ferredoxin--NADP+ reductase.
  
 
  0.639
SEO86462.1
NAD-dependent formate dehydrogenase catalytic subunit /NAD-dependent formate dehydrogenase iron-sulfur protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
  0.616
SEO74972.1
Dihydroorotase.
  
 
 0.484
Your Current Organism:
Salinihabitans flavidus
NCBI taxonomy Id: 569882
Other names: CCUG 56758, DSM 27842, KCTC 22485, Rhodobacteraceae bacterium ISL-46, S. flavidus, Salinihabitans flavidus Yoon et al. 2009, strain ISL-46
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