Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEO29798.1 | SEO94677.1 | SAMN04490248_103215 | SAMN04490248_1173 | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | Hypothetical protein. | 0.445 |
SEO29798.1 | SEP06602.1 | SAMN04490248_103215 | SAMN04490248_12234 | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | Molybdenum cofactor synthesis domain-containing protein. | 0.954 |
SEO29798.1 | nadD | SAMN04490248_103215 | SAMN04490248_11628 | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.916 |
SEO70741.1 | SEO94677.1 | SAMN04490248_11014 | SAMN04490248_1173 | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP). | Hypothetical protein. | 0.419 |
SEO70741.1 | thrS | SAMN04490248_11014 | SAMN04490248_10845 | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP). | threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). | 0.456 |
SEO82305.1 | SEO94677.1 | SAMN04490248_11351 | SAMN04490248_1173 | acyl-CoA thioesterase-1. | Hypothetical protein. | 0.418 |
SEO94656.1 | SEO94677.1 | SAMN04490248_1172 | SAMN04490248_1173 | Hypothetical protein. | Hypothetical protein. | 0.461 |
SEO94677.1 | SEO29798.1 | SAMN04490248_1173 | SAMN04490248_103215 | Hypothetical protein. | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | 0.445 |
SEO94677.1 | SEO70741.1 | SAMN04490248_1173 | SAMN04490248_11014 | Hypothetical protein. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP). | 0.419 |
SEO94677.1 | SEO82305.1 | SAMN04490248_1173 | SAMN04490248_11351 | Hypothetical protein. | acyl-CoA thioesterase-1. | 0.418 |
SEO94677.1 | SEO94656.1 | SAMN04490248_1173 | SAMN04490248_1172 | Hypothetical protein. | Hypothetical protein. | 0.461 |
SEO94677.1 | SEP06602.1 | SAMN04490248_1173 | SAMN04490248_12234 | Hypothetical protein. | Molybdenum cofactor synthesis domain-containing protein. | 0.403 |
SEO94677.1 | SEP21700.1 | SAMN04490248_1173 | SAMN04490248_14014 | Hypothetical protein. | PAS domain S-box-containing protein. | 0.406 |
SEO94677.1 | SEP21713.1 | SAMN04490248_1173 | SAMN04490248_14015 | Hypothetical protein. | Response regulator receiver domain-containing protein. | 0.468 |
SEO94677.1 | apt | SAMN04490248_1173 | SAMN04490248_103107 | Hypothetical protein. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.422 |
SEO94677.1 | nadD | SAMN04490248_1173 | SAMN04490248_11628 | Hypothetical protein. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.453 |
SEO94677.1 | thrS | SAMN04490248_1173 | SAMN04490248_10845 | Hypothetical protein. | threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). | 0.404 |
SEP06602.1 | SEO29798.1 | SAMN04490248_12234 | SAMN04490248_103215 | Molybdenum cofactor synthesis domain-containing protein. | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | 0.954 |
SEP06602.1 | SEO94677.1 | SAMN04490248_12234 | SAMN04490248_1173 | Molybdenum cofactor synthesis domain-containing protein. | Hypothetical protein. | 0.403 |
SEP06602.1 | nadD | SAMN04490248_12234 | SAMN04490248_11628 | Molybdenum cofactor synthesis domain-containing protein. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.665 |
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