STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO96080.1Carbon-monoxide dehydrogenase large subunit. (707 aa)    
Predicted Functional Partners:
SEO64587.1
Carbon-monoxide dehydrogenase small subunit.
 0.997
SEO63687.1
Carbon-monoxide dehydrogenase small subunit.
  0.992
SEP00832.1
Carbon-monoxide dehydrogenase small subunit.
 0.991
SEO39196.1
Carbon-monoxide dehydrogenase small subunit.
  0.988
SEP04293.1
Carbon-monoxide dehydrogenase small subunit.
  0.987
SEO71716.1
Xanthine dehydrogenase small subunit.
  
  0.977
SEP22619.1
Xanthine dehydrogenase small subunit.
  
  0.950
SEO63668.1
Carbon-monoxide dehydrogenase medium subunit.
 0.927
SEO39222.1
Carbon-monoxide dehydrogenase medium subunit.
 
 0.926
SEP00787.1
Carbon-monoxide dehydrogenase medium subunit.
 
 0.926
Your Current Organism:
Salinihabitans flavidus
NCBI taxonomy Id: 569882
Other names: CCUG 56758, DSM 27842, KCTC 22485, Rhodobacteraceae bacterium ISL-46, S. flavidus, Salinihabitans flavidus Yoon et al. 2009, strain ISL-46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.