STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO96617.1SPFH domain-Band 7 family protein. (193 aa)    
Predicted Functional Partners:
SEO54754.1
SPFH domain-Band 7 family protein.
 
     0.976
SEO54723.1
Hypothetical protein.
 
  
 0.901
SEO96527.1
Uncharacterized conserved protein YaaN involved in tellurite resistance; Belongs to the TelA family.
 
     0.863
SEO96508.1
5-bromo-4-chloroindolyl phosphate hydrolysis protein.
 
     0.849
SEO96542.1
Protein of unknown function.
       0.821
SEO96566.1
Hypothetical protein.
       0.776
SEO96590.1
Hypothetical protein.
       0.773
Your Current Organism:
Salinihabitans flavidus
NCBI taxonomy Id: 569882
Other names: CCUG 56758, DSM 27842, KCTC 22485, Rhodobacteraceae bacterium ISL-46, S. flavidus, Salinihabitans flavidus Yoon et al. 2009, strain ISL-46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.