STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO98771.1Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. (503 aa)    
Predicted Functional Partners:
SEO98729.1
Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family.
 
 
  0.921
SEO98692.1
Catechol 2,3-dioxygenase.
 
  
  0.897
SEO98706.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
  0.888
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
   
  0.886
SEO98789.1
ferredoxin--NADP+ reductase.
 
 
  0.881
SEO59726.1
Glutamate synthase (NADPH) large subunit.
  
 
 0.876
SEO98632.1
Phenylpropionate dioxygenase, large terminal subunit.
 
 
  0.861
nadX
Aspartate dehydrogenase; Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate.
 
    0.842
SEO98804.1
MioC protein.
 
 
   0.824
SEO57318.1
Acyl transferase domain-containing protein.
   
 0.819
Your Current Organism:
Salinihabitans flavidus
NCBI taxonomy Id: 569882
Other names: CCUG 56758, DSM 27842, KCTC 22485, Rhodobacteraceae bacterium ISL-46, S. flavidus, Salinihabitans flavidus Yoon et al. 2009, strain ISL-46
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.