STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP01344.1Protein of unknown function. (154 aa)    
Predicted Functional Partners:
SEO96542.1
Protein of unknown function.
  
     0.644
SEP01324.1
methylmalonyl-CoA mutase.
       0.628
SEO63621.1
Protein of unknown function.
  
     0.616
SEO35470.1
Hypothetical protein.
  
     0.582
ftsQ
Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
     0.532
SEO06528.1
Hypothetical protein.
  
     0.491
SEO53052.1
Putative metalloprotease.
  
     0.491
SEO53477.1
Sporulation related domain-containing protein.
  
     0.490
SEO53933.1
Hypothetical protein.
  
     0.490
SEP01251.1
Endonuclease/Exonuclease/phosphatase family protein.
 
     0.482
Your Current Organism:
Salinihabitans flavidus
NCBI taxonomy Id: 569882
Other names: CCUG 56758, DSM 27842, KCTC 22485, Rhodobacteraceae bacterium ISL-46, S. flavidus, Salinihabitans flavidus Yoon et al. 2009, strain ISL-46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.