STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP02311.13-oxoacyl-[acyl-carrier protein] reductase. (244 aa)    
Predicted Functional Partners:
SEP02288.1
Hypothetical protein.
 
 
  0.864
SEO59726.1
Glutamate synthase (NADPH) large subunit.
     
 0.831
SEO81218.1
Cytochrome P450.
   
 0.810
SEO57318.1
Acyl transferase domain-containing protein.
  
 0.748
SEO25982.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
     0.690
SEO57274.1
Natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
  
 0.640
SEP24222.1
Reductive dehalogenase.
   
 0.574
SEO05316.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
   
 0.573
lcdH
Carnitine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.
  
 0.569
SEP08271.1
Hypothetical protein.
    
  0.568
Your Current Organism:
Salinihabitans flavidus
NCBI taxonomy Id: 569882
Other names: CCUG 56758, DSM 27842, KCTC 22485, Rhodobacteraceae bacterium ISL-46, S. flavidus, Salinihabitans flavidus Yoon et al. 2009, strain ISL-46
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