STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ackA-2Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (402 aa)    
Predicted Functional Partners:
SEP19784.1
Phosphate butyryltransferase.
 
 0.996
SEO41625.1
Phosphate acetyltransferase.
 
 0.988
SEO09953.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 
 0.847
SEO17884.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 
 0.847
SEO50033.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 
 0.847
SEP19801.1
Polyhydroxyalkanoate synthase.
 
  
 0.816
glcB
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
   
 
 0.792
SEP07709.1
Acetyl-CoA hydrolase/transferase C-terminal domain-containing protein.
     
 0.771
SEP04550.1
Acyl-CoA synthetase (NDP forming).
    
 0.770
SEP08308.1
Aldehyde dehydrogenase (NAD+).
 
 
 0.759
Your Current Organism:
Salinihabitans flavidus
NCBI taxonomy Id: 569882
Other names: CCUG 56758, DSM 27842, KCTC 22485, Rhodobacteraceae bacterium ISL-46, S. flavidus, Salinihabitans flavidus Yoon et al. 2009, strain ISL-46
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