STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP21220.1Signal transduction histidine kinase. (473 aa)    
Predicted Functional Partners:
SEP21207.1
Two-component system, OmpR family, response regulator.
 0.979
SEO51047.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.978
SEO36825.1
PAS domain S-box-containing protein.
 
 
0.969
SEO57605.1
Hypothetical protein.
  
0.952
SEP21700.1
PAS domain S-box-containing protein.
 
 
0.940
SEP21233.1
Putative membrane protein.
 
     0.922
SEO19106.1
PAS domain S-box-containing protein.
 
 
0.919
SEO97606.1
PAS domain S-box-containing protein.
 
 
0.917
SEP18356.1
Transcriptional regulatory protein, C terminal.
 
 0.913
SEP21196.1
EF hand.
 
 
   0.896
Your Current Organism:
Salinihabitans flavidus
NCBI taxonomy Id: 569882
Other names: CCUG 56758, DSM 27842, KCTC 22485, Rhodobacteraceae bacterium ISL-46, S. flavidus, Salinihabitans flavidus Yoon et al. 2009, strain ISL-46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.