Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEO33291.1 | SEP21322.1 | SAMN04490248_10411 | SAMN04490248_13918 | Disulfide bond formation protein DsbB. | Protein-disulfide isomerase. | 0.618 |
SEP18205.1 | SEP18339.1 | SAMN04490248_13319 | SAMN04490248_13326 | Cytochrome c556. | HAMP domain-containing protein. | 0.630 |
SEP18205.1 | SEP21169.1 | SAMN04490248_13319 | SAMN04490248_1396 | Cytochrome c556. | Rhodanese-related sulfurtransferase. | 0.687 |
SEP18205.1 | SEP21220.1 | SAMN04490248_13319 | SAMN04490248_13910 | Cytochrome c556. | Signal transduction histidine kinase. | 0.681 |
SEP18205.1 | SEP21258.1 | SAMN04490248_13319 | SAMN04490248_13913 | Cytochrome c556. | Cytochrome C oxidase, cbb3-type, subunit III. | 0.701 |
SEP18205.1 | SEP21296.1 | SAMN04490248_13319 | SAMN04490248_13916 | Cytochrome c556. | Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA). | 0.486 |
SEP18205.1 | SEP21309.1 | SAMN04490248_13319 | SAMN04490248_13917 | Cytochrome c556. | Cytochrome C oxidase, cbb3-type, subunit III. | 0.567 |
SEP18205.1 | SEP21322.1 | SAMN04490248_13319 | SAMN04490248_13918 | Cytochrome c556. | Protein-disulfide isomerase. | 0.591 |
SEP18339.1 | SEP18205.1 | SAMN04490248_13326 | SAMN04490248_13319 | HAMP domain-containing protein. | Cytochrome c556. | 0.630 |
SEP18339.1 | SEP21169.1 | SAMN04490248_13326 | SAMN04490248_1396 | HAMP domain-containing protein. | Rhodanese-related sulfurtransferase. | 0.689 |
SEP18339.1 | SEP21258.1 | SAMN04490248_13326 | SAMN04490248_13913 | HAMP domain-containing protein. | Cytochrome C oxidase, cbb3-type, subunit III. | 0.717 |
SEP18339.1 | SEP21296.1 | SAMN04490248_13326 | SAMN04490248_13916 | HAMP domain-containing protein. | Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA). | 0.669 |
SEP18339.1 | SEP21309.1 | SAMN04490248_13326 | SAMN04490248_13917 | HAMP domain-containing protein. | Cytochrome C oxidase, cbb3-type, subunit III. | 0.443 |
SEP18339.1 | SEP21322.1 | SAMN04490248_13326 | SAMN04490248_13918 | HAMP domain-containing protein. | Protein-disulfide isomerase. | 0.604 |
SEP18339.1 | SEP21336.1 | SAMN04490248_13326 | SAMN04490248_13919 | HAMP domain-containing protein. | L,D-transpeptidase catalytic domain. | 0.448 |
SEP21169.1 | SEP18205.1 | SAMN04490248_1396 | SAMN04490248_13319 | Rhodanese-related sulfurtransferase. | Cytochrome c556. | 0.687 |
SEP21169.1 | SEP18339.1 | SAMN04490248_1396 | SAMN04490248_13326 | Rhodanese-related sulfurtransferase. | HAMP domain-containing protein. | 0.689 |
SEP21169.1 | SEP21220.1 | SAMN04490248_1396 | SAMN04490248_13910 | Rhodanese-related sulfurtransferase. | Signal transduction histidine kinase. | 0.811 |
SEP21169.1 | SEP21322.1 | SAMN04490248_1396 | SAMN04490248_13918 | Rhodanese-related sulfurtransferase. | Protein-disulfide isomerase. | 0.587 |
SEP21220.1 | SEP18205.1 | SAMN04490248_13910 | SAMN04490248_13319 | Signal transduction histidine kinase. | Cytochrome c556. | 0.681 |
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