STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000341105_00013Unannotated protein. (184 aa)    
Predicted Functional Partners:
GCA_000341105_00012
Unannotated protein.
 
     0.677
GCA_000341105_05189
Unannotated protein.
  
     0.602
GCA_000341105_05573
Unannotated protein.
  
     0.594
GCA_000341105_04912
Unannotated protein.
  
     0.556
GCA_000341105_02999
Unannotated protein.
  
     0.532
GCA_000341105_04475
Unannotated protein.
  
     0.479
GCA_000341105_05959
Unannotated protein.
  
     0.424
GCA_000341105_00710
Unannotated protein.
  
     0.416
GCA_000341105_05971
Unannotated protein.
  
     0.400
Your Current Organism:
Nocardiopsis potens
NCBI taxonomy Id: 570268
Other names: N. potens DSM 45234, Nocardiopsis potens DSM 45234, Nocardiopsis potens IMMIB L-21, Nocardiopsis sp. IMMIB L-21
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.