STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000341105_00927Unannotated protein. (237 aa)    
Predicted Functional Partners:
GCA_000341105_05044
Unannotated protein.
  0.845
GCA_000341105_05042
Unannotated protein.
  
 0.763
GCA_000341105_01843
Unannotated protein.
  
 0.761
GCA_000341105_00527
Unannotated protein.
  
 0.753
GCA_000341105_01593
Unannotated protein.
  
 0.753
GCA_000341105_00324
Unannotated protein.
   
 0.730
GCA_000341105_01842
Unannotated protein.
 
  0.702
GCA_000341105_00465
Unannotated protein.
 
  0.666
GCA_000341105_05390
Unannotated protein.
  
     0.638
GCA_000341105_01243
Unannotated protein.
  
 
 
0.615
Your Current Organism:
Nocardiopsis potens
NCBI taxonomy Id: 570268
Other names: N. potens DSM 45234, Nocardiopsis potens DSM 45234, Nocardiopsis potens IMMIB L-21, Nocardiopsis sp. IMMIB L-21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.