STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000341105_03158Unannotated protein. (484 aa)    
Predicted Functional Partners:
GCA_000341105_03157
Unannotated protein.
 
 
 0.999
GCA_000341105_00774
Unannotated protein.
  
 0.990
GCA_000341105_03159
Unannotated protein.
 
 
 0.960
GCA_000341105_02267
Unannotated protein.
 
 
 0.925
GCA_000341105_04797
Unannotated protein.
 
 
 0.923
GCA_000341105_03003
Unannotated protein.
  
 
 0.905
GCA_000341105_03341
Unannotated protein.
  
 
 0.882
GCA_000341105_03010
Unannotated protein.
  
 
 0.844
GCA_000341105_00335
Unannotated protein.
    
 0.828
GCA_000341105_01609
Unannotated protein.
     
 0.783
Your Current Organism:
Nocardiopsis potens
NCBI taxonomy Id: 570268
Other names: N. potens DSM 45234, Nocardiopsis potens DSM 45234, Nocardiopsis potens IMMIB L-21, Nocardiopsis sp. IMMIB L-21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.