STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000341105_03809Unannotated protein. (552 aa)    
Predicted Functional Partners:
GCA_000341105_03811
Unannotated protein.
 
  
 0.725
GCA_000341105_04457
Unannotated protein.
    
  0.721
GCA_000341105_00209
Unannotated protein.
  
  
 0.718
GCA_000341105_00210
Unannotated protein.
  
  
 0.718
GCA_000341105_00216
Unannotated protein.
  
  
 0.692
GCA_000341105_00212
Unannotated protein.
  
  
 0.686
GCA_000341105_03808
Unannotated protein.
 
  
 0.686
GCA_000341105_03812
Unannotated protein.
 
  
 0.667
GCA_000341105_04951
Unannotated protein.
  
  
 0.667
GCA_000341105_00061
Unannotated protein.
 
  
 0.649
Your Current Organism:
Nocardiopsis potens
NCBI taxonomy Id: 570268
Other names: N. potens DSM 45234, Nocardiopsis potens DSM 45234, Nocardiopsis potens IMMIB L-21, Nocardiopsis sp. IMMIB L-21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.