STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000341105_04002Unannotated protein. (337 aa)    
Predicted Functional Partners:
GCA_000341105_04001
Unannotated protein.
 
 0.956
GCA_000341105_04000
Unannotated protein.
 
 0.950
GCA_000341105_01611
Unannotated protein.
  
 
 0.948
GCA_000341105_04003
Unannotated protein.
 
 0.922
GCA_000341105_00698
Unannotated protein.
 
 0.919
GCA_000341105_01158
Unannotated protein.
 
 0.919
GCA_000341105_01660
Unannotated protein.
 
 0.919
GCA_000341105_02328
Unannotated protein.
 
 0.919
GCA_000341105_03286
Unannotated protein.
 
 0.919
GCA_000341105_00073
Unannotated protein.
 
 0.918
Your Current Organism:
Nocardiopsis potens
NCBI taxonomy Id: 570268
Other names: N. potens DSM 45234, Nocardiopsis potens DSM 45234, Nocardiopsis potens IMMIB L-21, Nocardiopsis sp. IMMIB L-21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.