STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000341105_04226Unannotated protein. (535 aa)    
Predicted Functional Partners:
GCA_000341105_02734
Unannotated protein.
 
 
 0.992
GCA_000341105_04224
Unannotated protein.
 
 0.991
GCA_000341105_03715
Unannotated protein.
 
 0.979
GCA_000341105_00036
Unannotated protein.
 
 0.977
GCA_000341105_02023
Unannotated protein.
  
 
0.971
GCA_000341105_05698
Unannotated protein.
  
 
0.966
GCA_000341105_05697
Unannotated protein.
  
 
 0.951
GCA_000341105_05696
Unannotated protein.
 
 0.949
GCA_000341105_05930
Unannotated protein.
  
 
 0.909
GCA_000341105_00008
Unannotated protein.
  
 
 0.907
Your Current Organism:
Nocardiopsis potens
NCBI taxonomy Id: 570268
Other names: N. potens DSM 45234, Nocardiopsis potens DSM 45234, Nocardiopsis potens IMMIB L-21, Nocardiopsis sp. IMMIB L-21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.