STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000341105_04434Unannotated protein. (517 aa)    
Predicted Functional Partners:
GCA_000341105_00158
Unannotated protein.
  
 
 0.999
GCA_000341105_04433
Unannotated protein.
 
 
 0.776
GCA_000341105_04818
Unannotated protein.
  
 
  0.763
GCA_000341105_00841
Unannotated protein.
  
 
 0.760
GCA_000341105_02983
Unannotated protein.
  
 
 0.760
GCA_000341105_03358
Unannotated protein.
    
 0.728
GCA_000341105_05421
Unannotated protein.
    
 0.728
GCA_000341105_01008
Unannotated protein.
    
  0.721
GCA_000341105_01141
Unannotated protein.
    
  0.721
GCA_000341105_01743
Unannotated protein.
    
  0.721
Your Current Organism:
Nocardiopsis potens
NCBI taxonomy Id: 570268
Other names: N. potens DSM 45234, Nocardiopsis potens DSM 45234, Nocardiopsis potens IMMIB L-21, Nocardiopsis sp. IMMIB L-21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.