STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000341105_04662Unannotated protein. (369 aa)    
Predicted Functional Partners:
GCA_000341105_04661
Unannotated protein.
  0.991
GCA_000341105_03003
Unannotated protein.
   
 0.828
GCA_000341105_04663
Unannotated protein.
       0.628
GCA_000341105_03008
Unannotated protein.
   
 0.624
GCA_000341105_03063
Unannotated protein.
   
 0.548
GCA_000341105_03006
Unannotated protein.
   
 0.547
GCA_000341105_05899
Unannotated protein.
   
 0.547
GCA_000341105_03010
Unannotated protein.
   
 0.519
GCA_000341105_05437
Unannotated protein.
   
 0.519
GCA_000341105_05504
Unannotated protein.
  
 
 0.498
Your Current Organism:
Nocardiopsis potens
NCBI taxonomy Id: 570268
Other names: N. potens DSM 45234, Nocardiopsis potens DSM 45234, Nocardiopsis potens IMMIB L-21, Nocardiopsis sp. IMMIB L-21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.