STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000341105_05403Unannotated protein. (317 aa)    
Predicted Functional Partners:
GCA_000341105_03910
Unannotated protein.
  
     0.756
GCA_000341105_04585
Unannotated protein.
  
     0.744
GCA_000341105_00289
Unannotated protein.
  
     0.722
GCA_000341105_05260
Unannotated protein.
  
     0.720
GCA_000341105_02807
Unannotated protein.
  
     0.710
GCA_000341105_03168
Unannotated protein.
  
     0.699
GCA_000341105_04033
Unannotated protein.
  
     0.697
GCA_000341105_03371
Unannotated protein.
  
     0.676
GCA_000341105_02165
Unannotated protein.
  
     0.669
GCA_000341105_02097
Unannotated protein.
  
     0.662
Your Current Organism:
Nocardiopsis potens
NCBI taxonomy Id: 570268
Other names: N. potens DSM 45234, Nocardiopsis potens DSM 45234, Nocardiopsis potens IMMIB L-21, Nocardiopsis sp. IMMIB L-21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.