STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000341105_05597Unannotated protein. (286 aa)    
Predicted Functional Partners:
GCA_000341105_02342
Unannotated protein.
  
   
 0.839
GCA_000341105_03992
Unannotated protein.
 
 
 0.832
GCA_000341105_01496
Unannotated protein.
  
    0.756
GCA_000341105_05352
Unannotated protein.
 
 
 0.746
GCA_000341105_03262
Unannotated protein.
  
    0.743
GCA_000341105_03989
Unannotated protein.
  
     0.710
GCA_000341105_04948
Unannotated protein.
  
     0.641
GCA_000341105_00392
Unannotated protein.
    
 0.634
GCA_000341105_03988
Unannotated protein.
  
     0.626
GCA_000341105_05598
Unannotated protein.
       0.612
Your Current Organism:
Nocardiopsis potens
NCBI taxonomy Id: 570268
Other names: N. potens DSM 45234, Nocardiopsis potens DSM 45234, Nocardiopsis potens IMMIB L-21, Nocardiopsis sp. IMMIB L-21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.