Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
dhe4 | earS | EZMO1_4076 | EZMO1_3663 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). | 0.830 |
dhe4 | gcvT | EZMO1_4076 | EZMO1_2949 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Aminomethyltransferase. | 0.813 |
dhe4 | gdh | EZMO1_4076 | EZMO1_3012 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate dehydrogenase. | 0.830 |
dhe4 | glsA | EZMO1_4076 | EZMO1_0570 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutaminase, core; Belongs to the glutaminase family. | 0.834 |
dhe4 | gltB | EZMO1_4076 | EZMO1_3930 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate synthase subunit alpha. | 0.998 |
dhe4 | murI | EZMO1_4076 | EZMO1_0098 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.565 |
dhe4 | proA | EZMO1_4076 | EZMO1_0924 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.836 |
dhe4 | putA | EZMO1_4076 | EZMO1_4236 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.908 |
dhe4 | speB | EZMO1_4076 | EZMO1_0036 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Agmatinase; Belongs to the arginase family. | 0.875 |
earS | dhe4 | EZMO1_3663 | EZMO1_4076 | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.830 |
earS | glsA | EZMO1_3663 | EZMO1_0570 | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). | Glutaminase, core; Belongs to the glutaminase family. | 0.814 |
earS | gltB | EZMO1_3663 | EZMO1_3930 | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). | Glutamate synthase subunit alpha. | 0.920 |
earS | putA | EZMO1_3663 | EZMO1_4236 | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). | Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.830 |
gcvT | dhe4 | EZMO1_2949 | EZMO1_4076 | Aminomethyltransferase. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.813 |
gcvT | glsA | EZMO1_2949 | EZMO1_0570 | Aminomethyltransferase. | Glutaminase, core; Belongs to the glutaminase family. | 0.832 |
gcvT | gltB | EZMO1_2949 | EZMO1_3930 | Aminomethyltransferase. | Glutamate synthase subunit alpha. | 0.941 |
gcvT | putA | EZMO1_2949 | EZMO1_4236 | Aminomethyltransferase. | Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.894 |
gdh | dhe4 | EZMO1_3012 | EZMO1_4076 | Glutamate dehydrogenase. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.830 |
gdh | glsA | EZMO1_3012 | EZMO1_0570 | Glutamate dehydrogenase. | Glutaminase, core; Belongs to the glutaminase family. | 0.813 |
gdh | gltB | EZMO1_3012 | EZMO1_3930 | Glutamate dehydrogenase. | Glutamate synthase subunit alpha. | 0.935 |
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