STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMO54857.1Transcriptional regulator. (140 aa)    
Predicted Functional Partners:
nagE1
PTS system N-acetylglucosamine-specific EIICBA component.
     
 0.596
ptgCB2
PTS system glucose-specific transporter subunit IIBC.
     
 0.596
nagE2
PTS system N-acetylglucosamine-specific transporter subunit IIBC.
     
 0.596
ptgCB3
PTS system glucose-specific transporter subunit IIBC.
     
 0.596
nagE3
PTS system N-acetylglucosamine-specific transporter subunit IIBC.
     
 0.596
mdlB
Multidrug ABC transporter ATP-binding protein.
  
  
 0.510
mdlA
Multidrug ABC transporter ATP-binding protein.
  
  
 0.510
gshB2
Glutathione synthase.
       0.506
AMO54858.1
Hypothetical protein.
       0.500
Your Current Organism:
Endozoicomonas montiporae
NCBI taxonomy Id: 570277
Other names: E. montiporae CL-33, Endozoicomonas montiporae CL-33, Endozoicomonas montiporae str. CL-33, Endozoicomonas montiporae strain CL-33, Endozoicomonas sp. CL-33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.