STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilX1Type IV pilus assembly protein PilX. (197 aa)    
Predicted Functional Partners:
pilW1
Type IV pilus assembly protein PilW.
 
  
 0.981
pilV1
Type IV fimbrial biogenesis protein PilV.
 
  
 0.974
pilY1
Type IV pilus assembly protein PilY.
 
  
 0.964
fimT1_2
Type-4 fimbrial pilin related signal peptide protein.
 
   
 0.924
pilW2
Type IV pilus assembly protein PilW.
 
  
 0.921
pilY2
Type IV pilus assembly protein PilY.
 
  
 0.919
pilV2
Type IV fimbrial biogenesis protein PilV.
 
  
 0.896
fimT2
Type-4 fimbrial pilin related signal peptide protein.
 
  
 0.866
fimT1_1
Type-4 fimbrial pilin related signal peptide protein.
 
   
 0.847
AMO55702.1
Hypothetical protein.
 
  
 0.791
Your Current Organism:
Endozoicomonas montiporae
NCBI taxonomy Id: 570277
Other names: E. montiporae CL-33, Endozoicomonas montiporae CL-33, Endozoicomonas montiporae str. CL-33, Endozoicomonas montiporae strain CL-33, Endozoicomonas sp. CL-33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.