Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMO56937.1 | AMO56938.1 | EZMO1_2893 | EZMO1_2894 | Hypothetical protein. | Hypothetical protein. | 0.539 |
AMO56938.1 | AMO56937.1 | EZMO1_2894 | EZMO1_2893 | Hypothetical protein. | Hypothetical protein. | 0.539 |
AMO56938.1 | mazG | EZMO1_2894 | EZMO1_2895 | Hypothetical protein. | Nucleoside triphosphate pyrophosphohydrolase. | 0.445 |
AMO56938.1 | relA | EZMO1_2894 | EZMO1_2896 | Hypothetical protein. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.445 |
mazG | AMO56938.1 | EZMO1_2895 | EZMO1_2894 | Nucleoside triphosphate pyrophosphohydrolase. | Hypothetical protein. | 0.445 |
mazG | relA | EZMO1_2895 | EZMO1_2896 | Nucleoside triphosphate pyrophosphohydrolase. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.972 |
relA | AMO56938.1 | EZMO1_2896 | EZMO1_2894 | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Hypothetical protein. | 0.445 |
relA | mazG | EZMO1_2896 | EZMO1_2895 | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Nucleoside triphosphate pyrophosphohydrolase. | 0.972 |