Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMO55025.1 | hipL1 | EZMO1_0800 | EZMO1_3841 | Hypothetical protein. | Glucose sorbosone dehydrogenase. | 0.494 |
AMO56624.1 | hipL1 | EZMO1_2545 | EZMO1_3841 | Hypothetical protein. | Glucose sorbosone dehydrogenase. | 0.597 |
AMO57784.1 | fabG5 | EZMO1_3842 | EZMO1_3843 | Hypothetical protein. | 3-ketoacyl-ACP reductase. | 0.511 |
AMO57784.1 | hipL1 | EZMO1_3842 | EZMO1_3841 | Hypothetical protein. | Glucose sorbosone dehydrogenase. | 0.829 |
fabG5 | AMO57784.1 | EZMO1_3843 | EZMO1_3842 | 3-ketoacyl-ACP reductase. | Hypothetical protein. | 0.511 |
fabG5 | hipL1 | EZMO1_3843 | EZMO1_3841 | 3-ketoacyl-ACP reductase. | Glucose sorbosone dehydrogenase. | 0.511 |
fabG5 | nifJ | EZMO1_3843 | EZMO1_0669 | 3-ketoacyl-ACP reductase. | Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein. | 0.898 |
fba1 | gpi | EZMO1_3638 | EZMO1_4675 | Fructose-1,6-bisphosphate aldolase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.957 |
fba1 | hipL1 | EZMO1_3638 | EZMO1_3841 | Fructose-1,6-bisphosphate aldolase. | Glucose sorbosone dehydrogenase. | 0.449 |
fba1 | lsrF | EZMO1_3638 | EZMO1_4506 | Fructose-1,6-bisphosphate aldolase. | Aldolase. | 0.532 |
fba1 | nifJ | EZMO1_3638 | EZMO1_0669 | Fructose-1,6-bisphosphate aldolase. | Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein. | 0.940 |
fba1 | odpA | EZMO1_3638 | EZMO1_4809 | Fructose-1,6-bisphosphate aldolase. | Pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). | 0.815 |
fba1 | tpi | EZMO1_3638 | EZMO1_4278 | Fructose-1,6-bisphosphate aldolase. | Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.983 |
gpi | fba1 | EZMO1_4675 | EZMO1_3638 | Glucose-6-phosphate isomerase; Belongs to the GPI family. | Fructose-1,6-bisphosphate aldolase. | 0.957 |
gpi | hipL1 | EZMO1_4675 | EZMO1_3841 | Glucose-6-phosphate isomerase; Belongs to the GPI family. | Glucose sorbosone dehydrogenase. | 0.493 |
gpi | lsrF | EZMO1_4675 | EZMO1_4506 | Glucose-6-phosphate isomerase; Belongs to the GPI family. | Aldolase. | 0.604 |
gpi | nifJ | EZMO1_4675 | EZMO1_0669 | Glucose-6-phosphate isomerase; Belongs to the GPI family. | Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein. | 0.959 |
gpi | odpA | EZMO1_4675 | EZMO1_4809 | Glucose-6-phosphate isomerase; Belongs to the GPI family. | Pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). | 0.868 |
gpi | tpi | EZMO1_4675 | EZMO1_4278 | Glucose-6-phosphate isomerase; Belongs to the GPI family. | Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.991 |
hipL1 | AMO55025.1 | EZMO1_3841 | EZMO1_0800 | Glucose sorbosone dehydrogenase. | Hypothetical protein. | 0.494 |
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