Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCW34591.1 | SCW34606.1 | SAMN02927924_00081 | SAMN02927924_00082 | Glutamate dehydrogenase. | Hypothetical protein. | 0.570 |
SCW34591.1 | SCW34622.1 | SAMN02927924_00081 | SAMN02927924_00083 | Glutamate dehydrogenase. | Hypothetical protein. | 0.499 |
SCW34591.1 | SCW34640.1 | SAMN02927924_00081 | SAMN02927924_00084 | Glutamate dehydrogenase. | Uncharacterized conserved protein, contains GH25 family domain. | 0.472 |
SCW34606.1 | SCW34591.1 | SAMN02927924_00082 | SAMN02927924_00081 | Hypothetical protein. | Glutamate dehydrogenase. | 0.570 |
SCW34606.1 | SCW34622.1 | SAMN02927924_00082 | SAMN02927924_00083 | Hypothetical protein. | Hypothetical protein. | 0.993 |
SCW34606.1 | SCW34640.1 | SAMN02927924_00082 | SAMN02927924_00084 | Hypothetical protein. | Uncharacterized conserved protein, contains GH25 family domain. | 0.962 |
SCW34606.1 | SCW34656.1 | SAMN02927924_00082 | SAMN02927924_00085 | Hypothetical protein. | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | 0.899 |
SCW34606.1 | SCW92111.1 | SAMN02927924_00082 | SAMN02927924_04125 | Hypothetical protein. | TonB-dependent receptor. | 0.474 |
SCW34622.1 | SCW34591.1 | SAMN02927924_00083 | SAMN02927924_00081 | Hypothetical protein. | Glutamate dehydrogenase. | 0.499 |
SCW34622.1 | SCW34606.1 | SAMN02927924_00083 | SAMN02927924_00082 | Hypothetical protein. | Hypothetical protein. | 0.993 |
SCW34622.1 | SCW34640.1 | SAMN02927924_00083 | SAMN02927924_00084 | Hypothetical protein. | Uncharacterized conserved protein, contains GH25 family domain. | 0.986 |
SCW34622.1 | SCW34656.1 | SAMN02927924_00083 | SAMN02927924_00085 | Hypothetical protein. | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | 0.954 |
SCW34622.1 | SCW46005.1 | SAMN02927924_00083 | SAMN02927924_00681 | Hypothetical protein. | Hypothetical protein. | 0.733 |
SCW34622.1 | SCW80831.1 | SAMN02927924_00083 | SAMN02927924_03056 | Hypothetical protein. | TonB-dependent receptor. | 0.410 |
SCW34622.1 | SCW92111.1 | SAMN02927924_00083 | SAMN02927924_04125 | Hypothetical protein. | TonB-dependent receptor. | 0.514 |
SCW34640.1 | SCW34591.1 | SAMN02927924_00084 | SAMN02927924_00081 | Uncharacterized conserved protein, contains GH25 family domain. | Glutamate dehydrogenase. | 0.472 |
SCW34640.1 | SCW34606.1 | SAMN02927924_00084 | SAMN02927924_00082 | Uncharacterized conserved protein, contains GH25 family domain. | Hypothetical protein. | 0.962 |
SCW34640.1 | SCW34622.1 | SAMN02927924_00084 | SAMN02927924_00083 | Uncharacterized conserved protein, contains GH25 family domain. | Hypothetical protein. | 0.986 |
SCW34640.1 | SCW34656.1 | SAMN02927924_00084 | SAMN02927924_00085 | Uncharacterized conserved protein, contains GH25 family domain. | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | 0.940 |
SCW34640.1 | SCW80831.1 | SAMN02927924_00084 | SAMN02927924_03056 | Uncharacterized conserved protein, contains GH25 family domain. | TonB-dependent receptor. | 0.450 |
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