STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW36769.15-methylcytosine-specific restriction enzyme A. (129 aa)    
Predicted Functional Partners:
SCW36786.1
Phage terminase-like protein, large subunit, contains N-terminal HTH domain.
 
  
 0.962
SCW80648.1
Phage terminase, small subunit, putative, P27 family.
 
    0.849
SCW80636.1
Phage terminase-like protein, large subunit, contains N-terminal HTH domain.
 
  
 0.837
SCW80627.1
Phage portal protein, HK97 family.
 
  
 0.792
SCW36876.1
Phage portal protein, HK97 family.
 
  
 0.788
SCW77535.1
Phage portal protein, HK97 family.
 
  
 0.783
SCW36753.1
Hypothetical protein.
       0.773
SCW80675.1
5-methylcytosine-specific restriction enzyme A.
  
     0.769
SCW80610.1
Phage major capsid protein, HK97 family.
 
     0.767
SCW77525.1
Phage terminase-like protein, large subunit, contains N-terminal HTH domain.
 
  
 0.755
Your Current Organism:
Sphingobium faniae
NCBI taxonomy Id: 570446
Other names: CGMCC 1.7749, DSM 21829, S. faniae, Sphingobium faniae Guo et al. 2010, Sphingobium sp. JZ-2, strain JZ-2
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