STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW38478.12,4-dienoyl-CoA reductase. (391 aa)    
Predicted Functional Partners:
SCW38461.1
Hypothetical protein.
       0.773
SCW53189.1
Glutamate synthase (NADPH) large subunit.
    
 0.771
SCW69124.1
Electron transfer flavoprotein beta subunit.
  
 
 0.551
SCW38491.1
Hypothetical protein.
       0.548
SCW69135.1
Electron transfer flavoprotein alpha subunit apoprotein.
   
 
 0.547
SCW72259.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.547
SCW34072.1
Nitrite reductase (NADH) small subunit.
    
  0.457
SCW38522.1
3alpha(or 20beta)-hydroxysteroid dehydrogenase.
    
  0.445
SCW80372.1
2,4-dienoyl-CoA reductase.
 
  
0.433
SCW53588.1
2,4-dienoyl-CoA reductase.
 
  
0.427
Your Current Organism:
Sphingobium faniae
NCBI taxonomy Id: 570446
Other names: CGMCC 1.7749, DSM 21829, S. faniae, Sphingobium faniae Guo et al. 2010, Sphingobium sp. JZ-2, strain JZ-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.