Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCW36156.1 | SCW39359.1 | SAMN02927924_00186 | SAMN02927924_00399 | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP). | Dihydroorotase. | 0.867 |
SCW36156.1 | SCW74169.1 | SAMN02927924_00186 | SAMN02927924_02546 | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP). | Dihydroorotase. | 0.847 |
SCW36156.1 | SCW80295.1 | SAMN02927924_00186 | SAMN02927924_02991 | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP). | CDP-4-dehydro-6-deoxyglucose reductase. | 0.970 |
SCW36156.1 | SCW85192.1 | SAMN02927924_00186 | SAMN02927924_03381 | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP). | Carbamoylphosphate synthase large subunit. | 0.847 |
SCW36156.1 | carA | SAMN02927924_00186 | SAMN02927924_00886 | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP). | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.944 |
SCW36156.1 | carB | SAMN02927924_00186 | SAMN02927924_00884 | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP). | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.886 |
SCW36156.1 | pyrB | SAMN02927924_00186 | SAMN02927924_00398 | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP). | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.972 |
SCW36156.1 | pyrD | SAMN02927924_00186 | SAMN02927924_02459 | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP). | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.975 |
SCW36156.1 | pyrE | SAMN02927924_00186 | SAMN02927924_02559 | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP). | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.998 |
SCW39359.1 | SCW36156.1 | SAMN02927924_00399 | SAMN02927924_00186 | Dihydroorotase. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP). | 0.867 |
SCW39359.1 | SCW39373.1 | SAMN02927924_00399 | SAMN02927924_00400 | Dihydroorotase. | Membrane protein. | 0.757 |
SCW39359.1 | SCW74169.1 | SAMN02927924_00399 | SAMN02927924_02546 | Dihydroorotase. | Dihydroorotase. | 0.947 |
SCW39359.1 | SCW80295.1 | SAMN02927924_00399 | SAMN02927924_02991 | Dihydroorotase. | CDP-4-dehydro-6-deoxyglucose reductase. | 0.896 |
SCW39359.1 | SCW85192.1 | SAMN02927924_00399 | SAMN02927924_03381 | Dihydroorotase. | Carbamoylphosphate synthase large subunit. | 0.786 |
SCW39359.1 | carA | SAMN02927924_00399 | SAMN02927924_00886 | Dihydroorotase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.888 |
SCW39359.1 | carB | SAMN02927924_00399 | SAMN02927924_00884 | Dihydroorotase. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.844 |
SCW39359.1 | pyrB | SAMN02927924_00399 | SAMN02927924_00398 | Dihydroorotase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
SCW39359.1 | pyrD | SAMN02927924_00399 | SAMN02927924_02459 | Dihydroorotase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.995 |
SCW39359.1 | pyrE | SAMN02927924_00399 | SAMN02927924_02559 | Dihydroorotase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.887 |
SCW39373.1 | SCW39359.1 | SAMN02927924_00400 | SAMN02927924_00399 | Membrane protein. | Dihydroorotase. | 0.757 |
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