STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW44245.1ATP-dependent DNA helicase RecG. (639 aa)    
Predicted Functional Partners:
SCW92171.1
HsdM N-terminal domain-containing protein.
  
    0.593
SCW83500.1
Putative ATP-dependent endonuclease of the OLD family.
  
    0.563
SCW94771.1
Protein of unknown function.
  
    0.563
SCW80543.1
Type I restriction enzyme M protein.
 
    0.488
SCW80553.1
Type I restriction enzyme, S subunit.
 
    0.485
SCW34542.1
Putative addiction module killer protein.
  
     0.459
SCW44258.1
Transposase, IS5 family.
       0.450
SCW92642.1
Hypothetical protein.
 
     0.445
SCW91417.1
ATP-dependent DNA helicase RecG.
    
  0.443
Your Current Organism:
Sphingobium faniae
NCBI taxonomy Id: 570446
Other names: CGMCC 1.7749, DSM 21829, S. faniae, Sphingobium faniae Guo et al. 2010, Sphingobium sp. JZ-2, strain JZ-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.