STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW46005.1Hypothetical protein. (109 aa)    
Predicted Functional Partners:
SCW34622.1
Hypothetical protein.
 
  
 0.733
SCW34656.1
Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
  
    0.453
SCW95050.1
Type IV secretion system protein VirB5.
  
     0.450
SCW67258.1
Transmembrane transcriptional regulator (anti-sigma factor RsiW).
  
     0.417
SCW72845.1
Transcriptional regulator, IclR family.
  
     0.407
SCW73905.1
Hypothetical protein.
  
     0.404
Your Current Organism:
Sphingobium faniae
NCBI taxonomy Id: 570446
Other names: CGMCC 1.7749, DSM 21829, S. faniae, Sphingobium faniae Guo et al. 2010, Sphingobium sp. JZ-2, strain JZ-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.